Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein csph | C5P43_16255 | Not Available | Positive | 2940240 - 2940452 | 7720.48 |
| threonine-rich inner membrane protein gfca | C5P43_16260 | Not Available | Positive | 2940894 - 2941199 | 9508.04 |
| lipoprotein gfcb | C5P43_16265 | Not Available | Positive | 2941306 - 2941950 | 24268.9 |
| hypothetical protein | C5P43_16270 | Not Available | Positive | 2941947 - 2942693 | 27297.6 |
| yjbh domain-containing protein | C5P43_16275 | Not Available | Positive | 2942693 - 2944789 | 78720.3 |
| polysaccharide export protein wza | C5P43_16280 | Not Available | Positive | 2944835 - 2945974 | 41743.2 |
| protein-tyrosine-phosphatase | C5P43_16285 | Not Available | Positive | 2945962 - 2946408 | 16386.9 |
| tyrosine-protein kinase etk | C5P43_16290 | Not Available | Positive | 2946428 - 2948608 | 81246.5 |
| phytase appa | C5P43_16295 | Not Available | Negative | 2948723 - 2950021 | 47032.5 |
| cytochrome bd-ii oxidase subunit cbdx | C5P43_16300 | Not Available | Negative | 2950101 - 2950193 | 3597.68 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





