Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase adhp | C5P43_16205 | Not Available | Positive | 2934173 - 2935183 | 35371.6 |
| transcriptional regulator | C5P43_16210 | Not Available | Positive | 2935330 - 2935614 | 10401.7 |
| formate dehydrogenase nitrate-inducible cytochrome b556(fdn) subunit | C5P43_16215 | Not Available | Negative | 2935665 - 2936318 | 25370.0 |
| formate dehydrogenase nitrate-inducible iron-sulfur subunit | C5P43_16220 | Not Available | Negative | 2936311 - 2937195 | 32240.4 |
| formate dehydrogenase | C5P43_16225 | Not Available | Negative | 2937208 - 2938131 | 33952.2 |
| electron transporter yccm | C5P43_16230 | Not Available | Positive | 2938132 - 2939127 | 36904.5 |
| protein gnsa | C5P43_16235 | Not Available | Negative | 2939175 - 2939348 | 6575.99 |
| cold-shock protein | C5P43_16240 | Not Available | Negative | 2939338 - 2939568 | 8701.56 |
| cold-shock protein | C5P43_16245 | Not Available | Negative | 2939543 - 2939731 | 7104.55 |
| cold-shock protein cspg | C5P43_16250 | Not Available | Negative | 2939742 - 2939954 | 7781.14 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





