Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fcd domain-containing protein | C5P43_15900 | Not Available | Positive | 2871049 - 2871714 | 25282.2 |
| tonb-dependent receptor | C5P43_15905 | Not Available | Negative | 2871750 - 2873852 | 77254.9 |
| hypothetical protein | C5P43_15910 | Not Available | Positive | 2873767 - 2873946 | 6734.26 |
| tonb-dependent receptor yncd | C5P43_15915 | Not Available | Negative | 2873886 - 2874011 | 4824.14 |
| ynce family protein | C5P43_15920 | Not Available | Positive | 2874094 - 2875155 | 38658.2 |
| l-asparagine permease | C5P43_15925 | Not Available | Negative | 2875270 - 2876769 | 54235.3 |
| enolase | C5P43_15930 | Not Available | Negative | 2876954 - 2878252 | 45657.6 |
| ctp synthetase | C5P43_15935 | Not Available | Negative | 2878340 - 2879977 | 60377.7 |
| nucleoside triphosphate pyrophosphohydrolase | C5P43_15940 | Not Available | Negative | 2880205 - 2880996 | 30414.0 |
| toxin mazf | C5P43_15945 | Not Available | Negative | 2881067 - 2881402 | 12158.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





