Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | C5P43_15845 | Not Available | Positive | 2864618 - 2865559 | 34397.2 |
| abc transporter permease | C5P43_15850 | Not Available | Positive | 2865549 - 2866343 | 28751.6 |
| gamma-aminobutyraldehyde dehydrogenase | C5P43_15855 | Not Available | Positive | 2866365 - 2867789 | 50848.8 |
| stress response membrane protein yncl | C5P43_15860 | Not Available | Negative | 2867886 - 2867981 | 3490.44 |
| hypothetical protein | C5P43_15865 | Not Available | Negative | 2867978 - 2868193 | 8618.49 |
| ghot/ortt family toxin | C5P43_15870 | Not Available | Positive | 2868128 - 2868349 | 8514.81 |
| duf2526 domain-containing protein | C5P43_15875 | Not Available | Positive | 2868435 - 2868668 | 8800.41 |
| hypothetical protein | C5P43_15880 | Not Available | Negative | 2868669 - 2869118 | 15856.1 |
| l-methionine sulfoximine/l-methionine sulfone acetyltransferase | C5P43_15885 | Not Available | Negative | 2869115 - 2869633 | 19258.7 |
| nadp-dependent oxidoreductase | C5P43_15895 | Not Available | Positive | 2869814 - 2870851 | 37601.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





