Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xaa-pro aminopeptidase | C5P43_15685 | Not Available | Negative | 2839235 - 2839813 | 22090.1 |
| yeca family protein | C5P43_15690 | Not Available | Negative | 2839839 - 2840423 | 21461.2 |
| hypothetical protein | C5P43_15695 | Not Available | Positive | 2840448 - 2840636 | 6833.36 |
| cell division protein zapa | C5P43_15700 | Not Available | Positive | 2840585 - 2840914 | 12594.9 |
| 5-formyltetrahydrofolate cyclo-ligase | C5P43_15710 | Not Available | Positive | 2841160 - 2841762 | 23242.3 |
| type i toxin-antitoxin system ibs family toxin | C5P43_15715 | Not Available | Negative | 2841863 - 2841922 | 2191.02 |
| type i toxin-antitoxin system ibs family toxin | C5P43_15725 | Not Available | Negative | 2842255 - 2842314 | 2179.02 |
| d-3-phosphoglycerate dehydrogenase | C5P43_15730 | Not Available | Negative | 2842543 - 2843775 | 44178.4 |
| ribose-5-phosphate isomerase | C5P43_15735 | Not Available | Negative | 2844031 - 2844690 | 22861.8 |
| hypothetical protein | C5P43_15740 | Not Available | Negative | 2844746 - 2844931 | 6756.52 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





