Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna cytosine methyltransferase | C5P43_15460 | Not Available | Positive | 2806701 - 2808128 | 54325.1 |
| duf1173 domain-containing protein | C5P43_15465 | Not Available | Positive | 2808379 - 2809698 | 49343.2 |
| hypothetical protein | C5P43_15470 | Not Available | Positive | 2809711 - 2809914 | 7300.92 |
| atp/gtp-binding protein | C5P43_15475 | Not Available | Negative | 2809978 - 2811183 | 45287.0 |
| duf4942 domain-containing protein | C5P43_15480 | Not Available | Negative | 2811180 - 2811998 | 30649.6 |
| hypothetical protein | C5P43_15485 | Not Available | Positive | 2812641 - 2813021 | 14178.0 |
| hypothetical protein | C5P43_15490 | Not Available | Positive | 2813079 - 2813744 | 24752.5 |
| is1 family transposase | C5P43_15495 | Not Available | Negative | 2813788 - 2813897 | 4160.06 |
| c4-dicarboxylic acid transporter daua | C5P43_15500 | Not Available | Negative | 2813898 - 2814793 | 31457.5 |
| ribose-phosphate pyrophosphokinase | C5P43_15510 | Not Available | Negative | 2814918 - 2815865 | 34220.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





