Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug transporter mdfa | C5P43_15360 | Not Available | Negative | 2791546 - 2792778 | 44291.7 |
| undecaprenyl-diphosphate phosphatase | C5P43_15365 | Not Available | Positive | 2793063 - 2793659 | 22419.9 |
| dna-binding transcriptional repressor deor | C5P43_15370 | Not Available | Positive | 2793717 - 2794475 | 28576.6 |
| d-alanyl-d-alanine carboxypeptidase | C5P43_15375 | Not Available | Negative | 2794522 - 2795724 | 43643.4 |
| glutathione s-transferase | C5P43_15380 | Not Available | Positive | 2795970 - 2796596 | 23714.4 |
| pqq-dependent sugar dehydrogenase | C5P43_15385 | Not Available | Negative | 2796593 - 2797708 | 41084.8 |
| biofilm regulator bssr | C5P43_15390 | Not Available | Negative | 2797819 - 2798202 | 14536.6 |
| 30s ribosomal protein s12 methylthiotransferase rimo | C5P43_15395 | Not Available | Positive | 2798415 - 2799740 | 49584.6 |
| ggdef domain-containing protein | C5P43_15400 | Not Available | Negative | 2799787 - 2801115 | 49923.8 |
| diguanylate phosphodiesterase | C5P43_15405 | Not Available | Negative | 2801123 - 2801191 | 2573.12 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





