Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinone biosynthesis protein ubij | C5P43_15310 | Not Available | Negative | 2782932 - 2783537 | 22153.8 |
| ubiquinone/menaquinone biosynthesis c-methyltransferase ubie | C5P43_15315 | Not Available | Negative | 2783551 - 2784306 | 28074.8 |
| dna recombination protein rmuc | C5P43_15320 | Not Available | Negative | 2784401 - 2785828 | 54767.6 |
| uridine phosphorylase | C5P43_15325 | Not Available | Negative | 2785969 - 2786730 | 27151.7 |
| carboxymethylenebutenolidase | C5P43_15330 | Not Available | Positive | 2786992 - 2787807 | 29469.8 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | C5P43_15335 | Not Available | Negative | 2787846 - 2788484 | 23709.2 |
| dna-binding transcriptional regulator | C5P43_15340 | Not Available | Negative | 2788492 - 2789028 | 20311.5 |
| mfs transporter | C5P43_15345 | Not Available | Positive | 2789112 - 2790320 | 41883.1 |
| had family hydrolase | C5P43_15350 | Not Available | Positive | 2790320 - 2791135 | 30265.0 |
| hypothetical protein | C5P43_15355 | Not Available | Positive | 2791221 - 2791505 | 10005.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





