Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter | C5P43_15210 | Not Available | Positive | 2762856 - 2763826 | 36143.6 |
| pentapeptide repeat-containing protein | C5P43_15215 | Not Available | Negative | 2763980 - 2765272 | 49363.0 |
| cation acetate symporter | C5P43_15220 | Not Available | Negative | 2765450 - 2767099 | 59186.7 |
| hypothetical protein | C5P43_15225 | Not Available | Negative | 2767096 - 2767410 | 11672.3 |
| acetyl-coenzyme a synthetase | C5P43_15230 | Not Available | Negative | 2767610 - 2769568 | 72097.5 |
| hypothetical protein | C5P43_15235 | Not Available | Positive | 2769679 - 2769864 | 7236.26 |
| ammonia-forming cytochrome c nitrite reductase subunit c552 | C5P43_15240 | Not Available | Positive | 2769960 - 2771396 | 53705.7 |
| cytochrome c-type protein nrfb | C5P43_15245 | Not Available | Positive | 2771441 - 2772007 | 20715.6 |
| protein nrfc | C5P43_15250 | Not Available | Positive | 2772004 - 2772675 | 24568.8 |
| protein nrfd | C5P43_15255 | Not Available | Positive | 2772672 - 2773628 | 35044.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





