Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail/dna circulation protein | C5P43_04370 | Not Available | Positive | 823825 - 825195 | 49429.5 |
| Tail protein | C5P43_04375 | Not Available | Positive | 825192 - 826271 | 39211.1 |
| Tail protein | C5P43_04380 | Not Available | Positive | 826271 - 826819 | 19568.2 |
| Tail protein | C5P43_04385 | Not Available | Positive | 826816 - 827244 | 16460.8 |
| Baseplate protein | C5P43_04390 | Not Available | Positive | 827231 - 828289 | 38124.1 |
| Tail protein | C5P43_04395 | Not Available | Positive | 828280 - 828864 | 21676.6 |
| Tail protein | C5P43_04400 | Not Available | Positive | 828868 - 829791 | 29598.4 |
| hypothetical protein | C5P43_04405 | Not Available | Positive | 829766 - 829969 | 7778.1 |
| Putative tail fiber assembly protein | C5P43_04410 | Not Available | Negative | 829935 - 830543 | 22076.3 |
| Tail fiber protein | C5P43_04415 | Not Available | Negative | 830543 - 831040 | 17760.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





