Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna recombination/repair protein reca | C5P43_15100 | Not Available | Positive | 2743973 - 2745034 | 37975.6 |
| regulatory protein recx | C5P43_15105 | Not Available | Positive | 2745277 - 2745777 | 19411.1 |
| alanine--trna ligase | C5P43_15110 | Not Available | Positive | 2745905 - 2748535 | 96009.8 |
| carbon storage regulator | C5P43_15115 | Not Available | Positive | 2748770 - 2748955 | 6856.34 |
| Trna-ser | Not Available | Not Available | Positive | 2749271 - 2749363 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 2749367 - 2749443 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 2749641 - 2749717 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 2749916 - 2749992 | Not Available |
| hypothetical protein | C5P43_15140 | Not Available | Negative | 2749994 - 2750793 | 27874.8 |
| transporter | C5P43_15145 | Not Available | Negative | 2750821 - 2752152 | 48317.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





