Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 1 fimbrial protein | C5P43_14885 | Not Available | Negative | 2699213 - 2699743 | 18921.6 |
| fimbrial biogenesis outer membrane usher protein | C5P43_14890 | Not Available | Negative | 2699757 - 2702408 | 96637.3 |
| fimbrial chaperone protein fimc | C5P43_14895 | Not Available | Negative | 2702450 - 2703169 | 26508.2 |
| fimbrial protein | C5P43_14900 | Not Available | Negative | 2703521 - 2704084 | 19145.6 |
| hypothetical protein | C5P43_14915 | Not Available | Negative | 2704803 - 2705027 | 8581.16 |
| type ii toxin-antitoxin system hipa family toxin | C5P43_14920 | Not Available | Negative | 2705038 - 2706360 | 49324.7 |
| transcriptional regulator | C5P43_14925 | Not Available | Negative | 2706360 - 2706626 | 10047.9 |
| autotransporter barrel domain-containing lipoprotein | C5P43_14930 | Not Available | Negative | 2706835 - 2711229 | 152852.0 |
| phosphate abc transporter substrate-binding protein | C5P43_14935 | Not Available | Negative | 2711230 - 2712529 | 48847.6 |
| glycogen phosphorylase | C5P43_14945 | Not Available | Negative | 2712645 - 2715092 | 93177.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





