Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| resolvase | C5P43_14780 | Not Available | Negative | 2680761 - 2680943 | 7042.62 |
| is6 family transposase is6100 | C5P43_14785 | Not Available | Positive | 2680972 - 2681736 | 29684.0 |
| hypothetical protein | C5P43_14795 | Not Available | Negative | 2681927 - 2682283 | 12830.5 |
| tetr/acrr family transcriptional regulator | C5P43_14800 | Not Available | Negative | 2682229 - 2682813 | 21629.4 |
| mfs transporter | C5P43_14805 | Not Available | Negative | 2682813 - 2684051 | 40959.1 |
| mph(a) family macrolide 2'-phosphotransferase | C5P43_14810 | Not Available | Negative | 2684048 - 2684953 | 33229.7 |
| is6 family transposase | C5P43_14815 | Not Available | Negative | 2685075 - 2685149 | 2724.26 |
| glutamate decarboxylase | C5P43_14820 | Not Available | Negative | 2685150 - 2685519 | 14056.5 |
| cytochrome-c peroxidase | C5P43_14825 | Not Available | Negative | 2685730 - 2687127 | 51570.3 |
| trehalase | C5P43_14830 | Not Available | Positive | 2687532 - 2689181 | 63704.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





