Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen-iii synthase | C5P43_14625 | Not Available | Negative | 2655082 - 2655822 | 27843.6 |
| hydroxymethylbilane synthase | C5P43_14630 | Not Available | Negative | 2655819 - 2656760 | 33867.0 |
| hypothetical protein | C5P43_14635 | Not Available | Negative | 2656913 - 2657119 | 7971.76 |
| adenylate cyclase | C5P43_14640 | Not Available | Positive | 2657147 - 2658864 | 65731.9 |
| hypothetical protein | C5P43_14645 | Not Available | Positive | 2658865 - 2659155 | 11192.4 |
| transporter | C5P43_14650 | Not Available | Negative | 2659152 - 2660813 | 58942.9 |
| heat-shock protein ibpb | C5P43_14655 | Not Available | Negative | 2661010 - 2661438 | 16094.1 |
| heat-shock protein ibpa | C5P43_14660 | Not Available | Negative | 2661550 - 2661963 | 15774.6 |
| ycek/yidq family lipoprotein | C5P43_14665 | Not Available | Positive | 2662269 - 2662601 | 11812.3 |
| duf3748 domain-containing protein | C5P43_14670 | Not Available | Negative | 2662603 - 2663850 | 46087.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





