Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail component | C5P43_17550 | Not Available | Negative | 3178720 - 3179298 | 21573.1 |
| Head-tail joining protein | C5P43_17555 | Not Available | Negative | 3179310 - 3179663 | 12779.8 |
| Dna packaging protein | C5P43_17560 | Not Available | Negative | 3179675 - 3180073 | 14337.7 |
| Capsid component | C5P43_17565 | Not Available | Negative | 3180113 - 3181138 | 38105.3 |
| Head-dna stabilization protein | C5P43_17570 | Not Available | Negative | 3181194 - 3181526 | 11571.5 |
| Capsid component | C5P43_17575 | Not Available | Negative | 3181536 - 3182855 | 45867.3 |
| Capsid component | C5P43_17580 | Not Available | Negative | 3182836 - 3183716 | 32458.3 |
| Putative minor tail protein | C5P43_17795 | Not Available | Positive | 3225079 - 3225250 | 6452.74 |
| Putative minor tail protein | C5P43_17800 | Not Available | Positive | 3225260 - 3225958 | 25637.9 |
| Tail fiber component | C5P43_17805 | Not Available | Positive | 3225963 - 3226706 | 28355.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





