Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-antigen assembly polymerase | C5P43_14575 | Not Available | Positive | 2646116 - 2647468 | 51520.2 |
| lipopolysaccharide n-acetylmannosaminouronosyltransferase | C5P43_14580 | Not Available | Positive | 2647471 - 2648211 | 27963.8 |
| transporter | C5P43_14585 | Not Available | Positive | 2648402 - 2649787 | 50402.1 |
| Trna-arg | Not Available | Not Available | Positive | 2649890 - 2649966 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 2650025 - 2650100 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2650121 - 2650207 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 2650250 - 2650326 | Not Available |
| anaerobic sulfatase maturase aslb | C5P43_14610 | Not Available | Positive | 2650473 - 2651708 | 46499.7 |
| heme biosynthesis protein hemy | C5P43_14615 | Not Available | Negative | 2652632 - 2653828 | 45247.7 |
| uroporphyrinogen-iii c-methyltransferase | C5P43_14620 | Not Available | Negative | 2653831 - 2655060 | 44282.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





