Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine:agmatine antiporter | C5P43_14525 | Not Available | Negative | 2636099 - 2637436 | 46845.3 |
| transcriptional regulator | C5P43_14530 | Not Available | Negative | 2637573 - 2638334 | 29022.4 |
| arginine decarboxylase | C5P43_14535 | Not Available | Negative | 2638659 - 2640926 | 84475.9 |
| melibiose operon regulatory protein | C5P43_14540 | Not Available | Negative | 2641125 - 2642033 | 34929.9 |
| hypothetical protein | C5P43_14545 | Not Available | Positive | 2642032 - 2642226 | 7471.65 |
| alpha-glucosidase/alpha-galactosidase | C5P43_14550 | Not Available | Positive | 2642316 - 2643671 | 50658.9 |
| melibiose:sodium transporter melb | C5P43_14555 | Not Available | Positive | 2643774 - 2645195 | 52627.5 |
| hypothetical protein | C5P43_14560 | Not Available | Negative | 2645150 - 2645329 | 6324.69 |
| hypothetical protein | C5P43_14565 | Not Available | Negative | 2645334 - 2645648 | 11610.5 |
| 4-alpha-l-fucosyltransferase | C5P43_14570 | Not Available | Positive | 2645649 - 2646119 | 17635.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





