Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P43_14180 | Not Available | Negative | 2577560 - 2577885 | 11300.6 |
| hypothetical protein | C5P43_14270 | Not Available | Positive | 2591044 - 2591376 | 12407.7 |
| hypothetical protein | C5P43_14275 | Not Available | Positive | 2591676 - 2591876 | 7086.59 |
| abc-f family atpase | C5P43_14280 | Not Available | Negative | 2591888 - 2593480 | 59861.4 |
| transpeptidase | C5P43_14285 | Not Available | Positive | 2593699 - 2594619 | 33327.2 |
| anion transporter | C5P43_14290 | Not Available | Negative | 2594678 - 2595796 | 41127.1 |
| transcriptional regulator mntr | C5P43_14295 | Not Available | Negative | 2595793 - 2596260 | 17641.3 |
| manganase accumulation protein mnts | C5P43_14300 | Not Available | Positive | 2596446 - 2596574 | 5031.31 |
| phosphoethanolamine transferase | C5P43_14305 | Not Available | Positive | 2596846 - 2598429 | 59732.4 |
| outer membrane protein x | C5P43_14310 | Not Available | Negative | 2598478 - 2598993 | 18603.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





