Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-galactopyranose mutase | C5P43_14125 | Not Available | Positive | 2566446 - 2567561 | 43657.8 |
| duf4422 domain-containing protein | C5P43_14130 | Not Available | Positive | 2567545 - 2568318 | 30598.9 |
| epsg family protein | C5P43_14135 | Not Available | Positive | 2568321 - 2569475 | 45223.9 |
| acetyltransferase | C5P43_14140 | Not Available | Positive | 2569491 - 2570057 | 21048.3 |
| hypothetical protein | C5P43_14145 | Not Available | Positive | 2570020 - 2571246 | 46256.3 |
| glycosyltransferase family 1 protein | C5P43_14150 | Not Available | Positive | 2571215 - 2572321 | 41438.8 |
| phosphogluconate dehydrogenase (nadp(+)-dependent, decarboxylating) | C5P43_14155 | Not Available | Positive | 2572358 - 2573764 | 51410.1 |
| udp-glucose 6-dehydrogenase | C5P43_14160 | Not Available | Positive | 2574013 - 2575179 | 43409.8 |
| nad-dependent epimerase | C5P43_14165 | Not Available | Negative | 2575245 - 2576249 | 37666.9 |
| lps o-antigen chain length determinant protein wzzb | C5P43_14175 | Not Available | Positive | 2576674 - 2577651 | 36306.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





