Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)(+) transhydrogenase (re/si-specific) subunit alpha | C5P43_13935 | Not Available | Positive | 2532796 - 2534328 | 54578.5 |
| nad(p)(+) transhydrogenase (re/si-specific) subunit beta | C5P43_13940 | Not Available | Positive | 2534339 - 2535727 | 48726.0 |
| transporter | C5P43_13945 | Not Available | Negative | 2535752 - 2535835 | 2825.47 |
| hypothetical protein | C5P43_14040 | Not Available | Negative | 2549890 - 2550174 | 10576.0 |
| alpha-amylase | C5P43_14045 | Not Available | Positive | 2550494 - 2552524 | 75780.6 |
| valine--pyruvate transaminase | C5P43_14050 | Not Available | Positive | 2552702 - 2553955 | 46688.9 |
| 4fe-4s dicluster domain-containing protein | C5P43_14055 | Not Available | Negative | 2554107 - 2554580 | 17435.1 |
| iclr family transcriptional regulator | C5P43_14060 | Not Available | Negative | 2554682 - 2555530 | 31095.5 |
| 3-dehydro-l-gulonate 2-dehydrogenase | C5P43_14065 | Not Available | Positive | 2555731 - 2556729 | 36588.9 |
| yhch/yjgk/yial family protein | C5P43_14070 | Not Available | Positive | 2556741 - 2557208 | 17519.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





