Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P43_13830 | Not Available | Negative | 2512984 - 2513286 | 11340.1 |
| deor family transcriptional regulator | C5P43_13835 | Not Available | Positive | 2513219 - 2514028 | 29574.3 |
| type ii toxin-antitoxin system yhav family toxin | C5P43_13840 | Not Available | Negative | 2514083 - 2514547 | 17842.1 |
| antitoxin prlf | C5P43_13845 | Not Available | Negative | 2514547 - 2514882 | 12359.7 |
| galactarate dehydratase | C5P43_13850 | Not Available | Negative | 2515031 - 2516602 | 56355.9 |
| mfs transporter | C5P43_13855 | Not Available | Positive | 2516977 - 2518311 | 49026.1 |
| 5-keto-4-deoxy-d-glucarate aldolase | C5P43_13860 | Not Available | Positive | 2518327 - 2519097 | 27400.6 |
| 2-hydroxy-3-oxopropionate reductase | C5P43_13865 | Not Available | Positive | 2519127 - 2520017 | 30661.6 |
| glycerate 2-kinase | C5P43_13870 | Not Available | Positive | 2520114 - 2521259 | 39122.7 |
| mannose-6-phosphate isomerase, class i | C5P43_13880 | Not Available | Negative | 2521675 - 2522123 | 16419.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





