Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine phosphatase family protein | C5P43_13780 | Not Available | Negative | 2504383 - 2504985 | 22290.8 |
| udp-4-amino-4-deoxy-l-arabinose-oxoglutarate aminotransferase | C5P43_13785 | Not Available | Positive | 2505293 - 2506432 | 41644.2 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | C5P43_13790 | Not Available | Positive | 2506436 - 2507404 | 36357.3 |
| aldose isomerase | C5P43_13795 | Not Available | Negative | 2507457 - 2507604 | 5580.56 |
| n-acetylglucosamine-6-phosphate deacetylase | C5P43_13800 | Not Available | Negative | 2507954 - 2509087 | 40299.8 |
| pts n-acetylgalactosamine transporter subunit iia | C5P43_13805 | Not Available | Negative | 2509084 - 2509518 | 15513.7 |
| pts n-acetylgalactosamine transporter subunit iid | C5P43_13810 | Not Available | Negative | 2509536 - 2510414 | 31816.6 |
| pts mannose/fructose/sorbose/n-acetylgalactosamine transporter subunit iic | C5P43_13815 | Not Available | Negative | 2510404 - 2511183 | 27350.5 |
| pts n-acetylgalactosamine transporter subunit iib | C5P43_13820 | Not Available | Negative | 2511194 - 2511667 | 17056.8 |
| tagatose-1,6-bisphosphate aldolase | C5P43_13825 | Not Available | Negative | 2511690 - 2512970 | 47221.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





