Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts mannose/fructose/sorbose transporter subunit iic | C5P43_13445 | Not Available | Negative | 2451595 - 2452395 | 27637.6 |
| pts mannose transporter subunit eiiab | C5P43_13450 | Not Available | Negative | 2452458 - 2453429 | 35049.6 |
| hypothetical protein | C5P43_13455 | Not Available | Positive | 2453400 - 2453594 | 7178.69 |
| hypothetical protein | C5P43_13460 | Not Available | Positive | 2453695 - 2453904 | 8119.76 |
| terc family protein | C5P43_13465 | Not Available | Positive | 2453892 - 2455448 | 56531.5 |
| cyclic diguanylate phosphodiesterase | C5P43_13470 | Not Available | Negative | 2455452 - 2457050 | 59715.0 |
| l-serine ammonia-lyase | C5P43_13475 | Not Available | Negative | 2457181 - 2458545 | 48909.5 |
| coenzyme a pyrophosphatase | C5P43_13480 | Not Available | Negative | 2458729 - 2459307 | 21464.9 |
| aminodeoxychorismate synthase component 1 | C5P43_13485 | Not Available | Negative | 2459311 - 2460672 | 51016.3 |
| yoah family protein | C5P43_13490 | Not Available | Positive | 2460746 - 2460925 | 6554.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





