Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P43_13075 | Not Available | Positive | 2393233 - 2393664 | 16981.1 |
| dna-binding response regulator | C5P43_13080 | Not Available | Positive | 2393885 - 2394040 | 5618.89 |
| dna-binding response regulator | C5P43_13085 | Not Available | Positive | 2394071 - 2394517 | 16725.4 |
| lytic transglycosylase | C5P43_13090 | Not Available | Negative | 2394562 - 2395038 | 18312.5 |
| hypothetical protein | C5P43_13095 | Not Available | Negative | 2395121 - 2395339 | 8055.23 |
| transcriptional regulator | C5P43_13100 | Not Available | Negative | 2395507 - 2396883 | 52755.8 |
| cesd/sycd/lcrh family type iii secretion system chaperone | C5P43_13105 | Not Available | Negative | 2397218 - 2397709 | 19034.1 |
| hypothetical protein | C5P43_13115 | Not Available | Positive | 2398618 - 2399043 | 16213.4 |
| hypothetical protein | C5P43_13120 | Not Available | Positive | 2399079 - 2399159 | 3203.84 |
| hypothetical protein | C5P43_13125 | Not Available | Negative | 2399192 - 2399674 | 18720.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





