Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P43_12890 | Not Available | Positive | 2369990 - 2370133 | 5051.03 |
| duf1971 domain-containing protein | C5P43_12895 | Not Available | Negative | 2370352 - 2370690 | 12669.9 |
| hypothetical protein | C5P43_12900 | Not Available | Positive | 2371404 - 2371601 | 7481.83 |
| duf1367 domain-containing protein | C5P43_12905 | Not Available | Positive | 2371504 - 2372103 | 23044.4 |
| duf1364 domain-containing protein | C5P43_12910 | Not Available | Positive | 2372103 - 2372393 | 10797.1 |
| duf1133 domain-containing protein | C5P43_12915 | Not Available | Positive | 2372390 - 2372932 | 20612.3 |
| hypothetical protein | C5P43_12920 | Not Available | Positive | 2373408 - 2373689 | 10975.7 |
| zinc ribbon domain-containing protein | C5P43_12930 | Not Available | Negative | 2374876 - 2376606 | 65001.9 |
| hypothetical protein | C5P43_12935 | Not Available | Negative | 2376606 - 2377295 | 26290.8 |
| hypothetical protein | C5P43_12940 | Not Available | Negative | 2377617 - 2377796 | 6976.51 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





