Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | C5P43_12835 | Not Available | Negative | 2360257 - 2360676 | 16166.3 |
| hypothetical protein | C5P43_12840 | Not Available | Positive | 2360756 - 2361010 | 9211.13 |
| rha family transcriptional regulator | C5P43_12845 | Not Available | Positive | 2361007 - 2361432 | 15922.3 |
| phage replisome organizer | C5P43_12850 | Not Available | Positive | 2361504 - 2362574 | 39708.3 |
| duf977 domain-containing protein | C5P43_12855 | Not Available | Positive | 2362615 - 2363037 | 16310.8 |
| high-affinity choline transporter bett | C5P43_12860 | Not Available | Positive | 2363372 - 2365375 | 73934.6 |
| duf2254 domain-containing protein | C5P43_12870 | Not Available | Positive | 2365439 - 2366716 | 46870.2 |
| lysr family transcriptional regulator | C5P43_12875 | Not Available | Negative | 2366847 - 2367728 | 32574.2 |
| gamma-glutamylcyclotransferase | C5P43_12880 | Not Available | Negative | 2367725 - 2368417 | 25631.9 |
| mfs transporter | C5P43_12885 | Not Available | Negative | 2368429 - 2369628 | 40525.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





