Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase family protein | C5P43_12775 | Not Available | Positive | 2354128 - 2355114 | 37424.1 |
| duf805 domain-containing protein | C5P43_12780 | Not Available | Positive | 2355407 - 2355772 | 14281.7 |
| duf805 domain-containing protein | C5P43_12785 | Not Available | Positive | 2356014 - 2356370 | 13313.5 |
| lysr family transcriptional regulator | C5P43_12795 | Not Available | Negative | 2356421 - 2357317 | 33231.3 |
| pirin family protein | C5P43_12800 | Not Available | Positive | 2357422 - 2358123 | 25985.0 |
| hypothetical protein | C5P43_12805 | Not Available | Positive | 2358146 - 2358310 | 5935.07 |
| hypothetical protein | C5P43_12810 | Not Available | Negative | 2358522 - 2358722 | 6958.33 |
| superinfection exclusion protein b | C5P43_12820 | Not Available | Positive | 2359185 - 2359673 | 19244.8 |
| duf1391 domain-containing protein | C5P43_12825 | Not Available | Negative | 2359670 - 2359825 | 5768.84 |
| hypothetical protein | C5P43_12830 | Not Available | Negative | 2359836 - 2360015 | 6826.28 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





