Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | C5P43_12720 | Not Available | Negative | 2348214 - 2348714 | 17741.6 |
| fimbrial protein | C5P43_12725 | Not Available | Negative | 2348744 - 2349367 | 23085.7 |
| gntr family transcriptional regulator | C5P43_12735 | Not Available | Positive | 2349756 - 2350532 | 29837.3 |
| deda family general envelope maintenance protein yqja | C5P43_12740 | Not Available | Positive | 2350877 - 2351539 | 24587.0 |
| modulator protein mzra | C5P43_12745 | Not Available | Positive | 2351543 - 2351926 | 14203.0 |
| duf1090 domain-containing protein | C5P43_12750 | Not Available | Positive | 2352073 - 2352441 | 13915.4 |
| duf883 domain-containing protein | C5P43_12755 | Not Available | Positive | 2352479 - 2352784 | 11052.1 |
| hypothetical protein | C5P43_12760 | Not Available | Positive | 2352787 - 2353191 | 15148.0 |
| hypothetical protein | C5P43_12765 | Not Available | Positive | 2353181 - 2353480 | 11781.4 |
| doxx family protein | C5P43_12770 | Not Available | Positive | 2353576 - 2354058 | 17246.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





