Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein stae | C5P43_12255 | Not Available | Negative | 2271532 - 2272140 | 21174.0 |
| fimbrial protein | C5P43_12260 | Not Available | Negative | 2272155 - 2272724 | 20292.1 |
| outer membrane usher protein | C5P43_12265 | Not Available | Negative | 2272741 - 2275341 | 95664.8 |
| fimbrial chaperone | C5P43_12270 | Not Available | Negative | 2275376 - 2276116 | 26946.1 |
| fimbrial protein | C5P43_12275 | Not Available | Negative | 2276221 - 2276805 | 20118.7 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | C5P43_12280 | Not Available | Negative | 2277175 - 2277654 | 17951.6 |
| polynucleotide adenylyltransferase pcnb | C5P43_12285 | Not Available | Negative | 2277651 - 2279069 | 54645.0 |
| trna glutamyl-q(34) synthetase gluqrs | C5P43_12290 | Not Available | Negative | 2279108 - 2280034 | 34891.6 |
| rna polymerase-binding transcription factor dksa | C5P43_12295 | Not Available | Negative | 2280071 - 2280526 | 17528.7 |
| dna/rna nuclease sfsa | C5P43_12300 | Not Available | Negative | 2280704 - 2281408 | 26230.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





