Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein slp | C5P43_12155 | Not Available | Positive | 2254540 - 2255106 | 20949.1 |
| dctr protein | C5P43_12160 | Not Available | Positive | 2255147 - 2255323 | 6710.4 |
| helix-turn-helix transcriptional regulator | C5P43_12165 | Not Available | Positive | 2255262 - 2255792 | 20452.5 |
| mgtc/sapb family protein | C5P43_12170 | Not Available | Negative | 2255834 - 2256481 | 23214.9 |
| acid-resistance protein | C5P43_12175 | Not Available | Negative | 2256545 - 2256871 | 12043.5 |
| acid stress chaperone hdea | C5P43_12180 | Not Available | Negative | 2256987 - 2257319 | 11858.2 |
| protein hded | C5P43_12185 | Not Available | Positive | 2257574 - 2258146 | 20904.6 |
| transcriptional regulator gade | C5P43_12190 | Not Available | Positive | 2258945 - 2259472 | 20600.6 |
| hypothetical protein | C5P43_12195 | Not Available | Negative | 2259473 - 2259751 | 9815.82 |
| multidrug resistance protein mdte | C5P43_12200 | Not Available | Positive | 2259811 - 2260968 | 41193.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





