Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Repressor protein ci | C5P43_14025 | Not Available | Positive | 2546236 - 2546832 | 21858.2 |
| Gp19 | C5P43_14030 | Not Available | Positive | 2546853 - 2548529 | 63488.1 |
| Tyrosine-type recombinase/integrase | C5P43_14035 | Not Available | Positive | 2548613 - 2549665 | 39957.7 |
| Oxidoreductase | C5P43_14185 | Not Available | Positive | 2577915 - 2579510 | 60430.4 |
| Portal protein | C5P43_14190 | Not Available | Positive | 2579510 - 2580535 | 38822.6 |
| duf4435 domain-containing protein | C5P43_14195 | Not Available | Negative | 2580620 - 2581657 | 40430.3 |
| Hypothetical protein gp32 | C5P43_14200 | Not Available | Negative | 2581664 - 2582830 | 45035.2 |
| Dna damage inducible protein | C5P43_14205 | Not Available | Negative | 2583175 - 2583480 | 11904.3 |
| Hypothetical protein | C5P43_14210 | Not Available | Negative | 2583419 - 2583607 | 7286.72 |
| Replication endonuclease | C5P43_14215 | Not Available | Negative | 2583761 - 2586175 | 92683.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





