Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cusa/czca family heavy metal efflux rnd transporter | C5P43_11940 | Not Available | Positive | 2210382 - 2213525 | 114760.0 |
| aromatic amino acid transporter arop | C5P43_11945 | Not Available | Positive | 2213627 - 2215003 | 50648.3 |
| miniconductance mechanosensitive channel | C5P43_11950 | Not Available | Negative | 2215071 - 2216318 | 46619.5 |
| oxygen-insensitive nad(p)h nitroreductase | C5P43_11955 | Not Available | Negative | 2216426 - 2217079 | 23860.3 |
| hypothetical protein | C5P43_11960 | Not Available | Negative | 2217173 - 2217541 | 14051.1 |
| duf1158 domain-containing protein | C5P43_11965 | Not Available | Negative | 2217606 - 2217854 | 9434.09 |
| glutamate--cysteine ligase | C5P43_11970 | Not Available | Negative | 2217920 - 2219038 | 41693.6 |
| hypothetical protein | C5P43_11975 | Not Available | Positive | 2219053 - 2219214 | 6186.57 |
| hypothetical protein | C5P43_11980 | Not Available | Negative | 2219242 - 2219481 | 8707.91 |
| type i toxin-antitoxin system hok family toxin | C5P43_11985 | Not Available | Positive | 2219480 - 2219632 | 5592.11 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





