Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P43_11830 | Not Available | Positive | 2193345 - 2193959 | 22968.1 |
| hypothetical protein | C5P43_11835 | Not Available | Positive | 2194033 - 2194212 | 6542.92 |
| ykgj family cysteine cluster protein | C5P43_11840 | Not Available | Negative | 2194207 - 2194536 | 11799.1 |
| hypothetical protein | C5P43_11845 | Not Available | Negative | 2194849 - 2195559 | 26650.7 |
| hypothetical protein | C5P43_11850 | Not Available | Negative | 2195528 - 2197171 | 60011.2 |
| fimbrial biogenesis outer membrane usher protein | C5P43_11855 | Not Available | Negative | 2197161 - 2199686 | 91224.7 |
| fimbrial chaperone ecpb | C5P43_11860 | Not Available | Negative | 2199712 - 2200380 | 24518.3 |
| common pilus major fimbrillin subunit ecpa | C5P43_11865 | Not Available | Negative | 2200438 - 2201025 | 20126.6 |
| helix-turn-helix transcriptional regulator | C5P43_11870 | Not Available | Negative | 2201100 - 2201690 | 23274.0 |
| hypothetical protein | C5P43_11880 | Not Available | Positive | 2202465 - 2202692 | 8839.47 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





