Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate reductase subunit alpha | C5P43_11665 | Not Available | Positive | 2160831 - 2164571 | 140173.0 |
| nitrate reductase subunit beta | C5P43_11670 | Not Available | Positive | 2164568 - 2166112 | 58548.1 |
| nitrate reductase molybdenum cofactor assembly chaperone | C5P43_11675 | Not Available | Positive | 2166112 - 2166807 | 26092.9 |
| respiratory nitrate reductase subunit gamma | C5P43_11680 | Not Available | Positive | 2166804 - 2167484 | 26019.5 |
| phzf family isomerase | C5P43_11685 | Not Available | Positive | 2167563 - 2168456 | 32303.6 |
| n-hydroxyarylamine o-acetyltransferase | C5P43_11690 | Not Available | Negative | 2168552 - 2169397 | 32393.6 |
| flavin reductase family protein | C5P43_11695 | Not Available | Positive | 2169570 - 2170139 | 20955.2 |
| tautomerase ppta | C5P43_11700 | Not Available | Negative | 2170143 - 2170370 | 8488.22 |
| hypothetical protein | C5P43_11710 | Not Available | Positive | 2171121 - 2171330 | 7866.46 |
| terminase small subunit | C5P43_11715 | Not Available | Positive | 2171334 - 2172425 | 40315.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





