Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fmn-binding protein mioc | C5P43_11560 | Not Available | Negative | 2138432 - 2138875 | 15826.5 |
| asnc family transcriptional regulator | C5P43_11565 | Not Available | Negative | 2138965 - 2139423 | 16888.7 |
| aspartate--ammonia ligase | C5P43_11570 | Not Available | Positive | 2139575 - 2140567 | 36727.8 |
| protein viaa | C5P43_11575 | Not Available | Negative | 2140572 - 2142023 | 55880.6 |
| atpase rava | C5P43_11580 | Not Available | Negative | 2142017 - 2143513 | 56419.1 |
| low affinity potassium transport system protein kup | C5P43_11585 | Not Available | Positive | 2143736 - 2145604 | 69298.3 |
| d-ribose pyranase | C5P43_11590 | Not Available | Positive | 2145771 - 2146190 | 15284.4 |
| ribose abc transporter atp-binding protein rbsa | C5P43_11595 | Not Available | Positive | 2146198 - 2147703 | 54988.0 |
| ribose abc transporter permease | C5P43_11600 | Not Available | Positive | 2147708 - 2148673 | 33454.0 |
| ribose abc transporter substrate-binding protein rbsb | C5P43_11605 | Not Available | Positive | 2148698 - 2149588 | 30940.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





