Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P43_11510 | Not Available | Positive | 2128518 - 2129255 | 27434.6 |
| glycosyltransferase family 2 protein | C5P43_11515 | Not Available | Positive | 2129206 - 2130132 | 35449.1 |
| hypothetical protein | C5P43_11520 | Not Available | Positive | 2130129 - 2131196 | 41056.1 |
| amylovoran biosynthesis protein amse | C5P43_11525 | Not Available | Positive | 2131189 - 2132004 | 31294.7 |
| phosphogluconate dehydrogenase (nadp(+)-dependent, decarboxylating) | C5P43_11530 | Not Available | Positive | 2132119 - 2133525 | 51497.2 |
| udp-glucose 6-dehydrogenase | C5P43_11535 | Not Available | Positive | 2133774 - 2134940 | 43658.2 |
| lps o-antigen chain length determinant protein wzzb | C5P43_11540 | Not Available | Positive | 2135087 - 2136064 | 36218.6 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | C5P43_11545 | Not Available | Negative | 2136236 - 2136847 | 22762.1 |
| imidazole glycerol phosphate synthase subunit hisf | C5P43_11550 | Not Available | Negative | 2136841 - 2137427 | 21355.5 |
| hypothetical protein | C5P43_11555 | Not Available | Negative | 2137428 - 2138053 | 22359.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





