Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetyl-d-mannosamine dehydrogenase | C5P43_11445 | Not Available | Positive | 2115853 - 2117115 | 45841.3 |
| dtdp-glucose 4,6-dehydratase | C5P43_11450 | Not Available | Positive | 2117115 - 2118182 | 39796.0 |
| glucose-1-phosphate thymidylyltransferase 2 | C5P43_11455 | Not Available | Positive | 2118201 - 2119082 | 32736.3 |
| dtdp-4-amino-4,6-dideoxy-d-galactose acyltransferase | C5P43_11460 | Not Available | Positive | 2119060 - 2119704 | 23146.6 |
| utp--glucose-1-phosphate uridylyltransferase | C5P43_11465 | Not Available | Positive | 2119761 - 2120654 | 32831.2 |
| hypothetical protein | C5P43_11470 | Not Available | Negative | 2120691 - 2120954 | 9749.84 |
| udp-glucose 4-epimerase gale | C5P43_11490 | Not Available | Positive | 2124186 - 2125241 | 39365.1 |
| glycerol-3-phosphate cytidylyltransferase | C5P43_11495 | Not Available | Positive | 2125765 - 2126157 | 15081.4 |
| o37 family o-antigen flippase | C5P43_11500 | Not Available | Positive | 2126159 - 2127391 | 47170.1 |
| hypothetical protein | C5P43_11505 | Not Available | Positive | 2127391 - 2128119 | 28785.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





