Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Dna damage inducible protein | C5P43_13975 | Not Available | Negative | 2540485 - 2540790 | 11779.0 |
| Hypothetical protein | C5P43_13980 | Not Available | Negative | 2540729 - 2540917 | 7272.69 |
| Replication endonuclease | C5P43_13985 | Not Available | Negative | 2541071 - 2543485 | 92330.4 |
| Dna adenine methyltransferase | C5P43_13990 | Not Available | Negative | 2543482 - 2544339 | 32153.1 |
| Zinc-finger containing protein | C5P43_13995 | Not Available | Negative | 2544336 - 2544563 | 8293.15 |
| Hypothetical protein | C5P43_14000 | Not Available | Negative | 2544563 - 2544796 | 8549.14 |
| Hypothetical protein | C5P43_14005 | Not Available | Negative | 2544864 - 2545205 | 12839.7 |
| Cell division blocking protein | C5P43_14010 | Not Available | Negative | 2545169 - 2545369 | 7689.41 |
| Regulatory cii family protein | C5P43_14015 | Not Available | Negative | 2545377 - 2545886 | 18113.9 |
| Regulator | C5P43_14020 | Not Available | Negative | 2545919 - 2546140 | 8265.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





