Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| microcompartment protein pdum | C5P43_11295 | Not Available | Negative | 2089475 - 2089966 | 18770.0 |
| phosphate propanoyltransferase | C5P43_11300 | Not Available | Negative | 2089963 - 2090595 | 23012.8 |
| bmc domain-containing protein | C5P43_11305 | Not Available | Negative | 2090598 - 2091020 | 14380.4 |
| propanediol utilization microcompartment protein pdua | C5P43_11310 | Not Available | Negative | 2091044 - 2091319 | 9054.02 |
| propanediol dehydratase | C5P43_11315 | Not Available | Negative | 2091339 - 2091689 | 12976.6 |
| diol dehydratase reactivase subunit alpha | C5P43_11320 | Not Available | Negative | 2091679 - 2093511 | 64344.0 |
| propanediol dehydratase small subunit pdue | C5P43_11325 | Not Available | Negative | 2093521 - 2094039 | 19344.0 |
| propanediol dehydratase medium subunit pdud | C5P43_11330 | Not Available | Negative | 2094054 - 2094722 | 24171.2 |
| propanediol dehydratase | C5P43_11335 | Not Available | Negative | 2094732 - 2096396 | 60404.8 |
| propanediol utilization microcompartment protein pdub | C5P43_11340 | Not Available | Negative | 2096415 - 2097227 | 28206.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





