Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase family protein | C5P43_11020 | Not Available | Positive | 2043204 - 2045441 | 85383.3 |
| phage receptor | C5P43_11025 | Not Available | Positive | 2045428 - 2048400 | 111401.0 |
| hypothetical protein | C5P43_11030 | Not Available | Positive | 2048401 - 2049291 | 33018.5 |
| hypothetical protein | C5P43_11035 | Not Available | Negative | 2049205 - 2049417 | 7626.19 |
| arac family transcriptional regulator | C5P43_11040 | Not Available | Positive | 2049474 - 2050235 | 29020.5 |
| Trna-arg | Not Available | Not Available | Positive | 2050281 - 2050357 | Not Available |
| dna-binding response regulator | C5P43_11055 | Not Available | Positive | 2050600 - 2051232 | 23664.9 |
| fimbriae assembly protein | C5P43_11060 | Not Available | Negative | 2051235 - 2051750 | 18149.6 |
| type 1 fimbrin d-mannose specific adhesin fimh | C5P43_11065 | Not Available | Negative | 2051761 - 2052768 | 36686.1 |
| fimbrial chaperone sfmc | C5P43_11075 | Not Available | Negative | 2055421 - 2056113 | 25459.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





