Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P43_10965 | Not Available | Positive | 2036262 - 2037398 | 41990.8 |
| hypothetical protein | C5P43_10970 | Not Available | Negative | 2037857 - 2038294 | 16107.6 |
| type iv secretion protein rhs | C5P43_10975 | Not Available | Negative | 2038383 - 2038676 | 10737.6 |
| type iv secretion protein rhs | C5P43_10980 | Not Available | Negative | 2038661 - 2038834 | 6180.5 |
| sel1 repeat family protein | C5P43_10985 | Not Available | Negative | 2039001 - 2039462 | 18000.5 |
| type iv secretion protein rhs | C5P43_10990 | Not Available | Negative | 2039474 - 2039833 | 13152.6 |
| lyase | C5P43_11000 | Not Available | Negative | 2040460 - 2041302 | 31906.4 |
| protein yhhh | C5P43_11005 | Not Available | Negative | 2041407 - 2041790 | 14531.6 |
| rhs repeat protein | C5P43_11010 | Not Available | Negative | 2041762 - 2042654 | 33259.8 |
| isas1 family transposase | C5P43_11015 | Not Available | Positive | 2042655 - 2042935 | 10419.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





