Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts sugar transporter subunit iib | C5P43_10385 | Not Available | Negative | 1920534 - 1920845 | 11185.1 |
| gntr family transcriptional regulator | C5P43_10390 | Not Available | Positive | 1921044 - 1921742 | 26464.8 |
| o-acetylserine/cysteine exporter | C5P43_10395 | Not Available | Negative | 1921787 - 1922686 | 32349.3 |
| transporter | C5P43_10400 | Not Available | Positive | 1922881 - 1924068 | 42512.3 |
| hypothetical protein | C5P43_10405 | Not Available | Positive | 1924195 - 1924290 | 3509.36 |
| sensor domain-containing diguanylate cyclase | C5P43_10410 | Not Available | Negative | 1924509 - 1925399 | 33895.5 |
| tigr00156 family protein | C5P43_10415 | Not Available | Negative | 1925654 - 1926046 | 14134.9 |
| hypothetical protein | C5P43_10420 | Not Available | Positive | 1926322 - 1926840 | 18211.7 |
| peptidyl-dipeptidase dcp | C5P43_10430 | Not Available | Negative | 1926885 - 1928930 | 77476.8 |
| hypothetical protein | C5P43_10435 | Not Available | Positive | 1928837 - 1929055 | 8148.41 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





