Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative endolysin | C5P43_13525 | Not Available | Negative | 2465562 - 2465939 | 14128.9 |
| Putative holin | C5P43_13530 | Not Available | Negative | 2465942 - 2466217 | 10559.6 |
| Putative holin | C5P43_13535 | Not Available | Negative | 2466207 - 2466599 | 13154.1 |
| hypothetical protein | C5P43_13540 | Not Available | Positive | 2466598 - 2466795 | 7069.7 |
| arac family transcriptional regulator | C5P43_13545 | Not Available | Negative | 2466775 - 2467518 | 27749.8 |
| duf1133 domain-containing protein | C5P43_13550 | Not Available | Negative | 2467748 - 2468290 | 20538.1 |
| Hypothetical protein | C5P43_13555 | Not Available | Negative | 2468287 - 2468577 | 10851.1 |
| Hypothetical protein | C5P43_13560 | Not Available | Negative | 2468577 - 2469176 | 22994.4 |
| Host killer protein | C5P43_13565 | Not Available | Negative | 2469643 - 2469798 | 5737.24 |
| Hypothetical protein | C5P43_13570 | Not Available | Positive | 2470321 - 2471094 | 30003.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





