Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P43_09255 | Not Available | Negative | 1731236 - 1731667 | 16340.2 |
| gamma carbonic anhydrase family protein | C5P43_09265 | Not Available | Positive | 1732142 - 1732912 | 28376.6 |
| duf1488 domain-containing protein | C5P43_09270 | Not Available | Negative | 1732888 - 1733145 | 10007.5 |
| shikimate dehydrogenase | C5P43_09275 | Not Available | Negative | 1733142 - 1733960 | 29465.4 |
| l-threonylcarbamoyladenylate synthase type 1 tsac | C5P43_09280 | Not Available | Negative | 1733965 - 1734537 | 20641.7 |
| hypothetical protein | C5P43_09285 | Not Available | Negative | 1734542 - 1735084 | 19862.0 |
| duf494 domain-containing protein | C5P43_09290 | Not Available | Negative | 1735113 - 1735586 | 18484.2 |
| dna-protecting protein dpra | C5P43_09295 | Not Available | Negative | 1735558 - 1736682 | 40957.3 |
| peptide deformylase | C5P43_09300 | Not Available | Positive | 1736812 - 1737321 | 19329.6 |
| methionyl-trna formyltransferase | C5P43_09305 | Not Available | Positive | 1737336 - 1738283 | 34156.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





