Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate lyase subunit alpha | C5P43_08895 | Not Available | Positive | 1649090 - 1649407 | 11915.2 |
| fad-dependent oxidoreductase | C5P43_08900 | Not Available | Positive | 1649408 - 1649948 | 19328.9 |
| ferredoxin-like protein fixx | C5P43_08905 | Not Available | Positive | 1649945 - 1650232 | 10479.5 |
| mfs transporter | C5P43_08910 | Not Available | Positive | 1650291 - 1651622 | 48669.8 |
| glutathione-regulated potassium-efflux system ancillary protein keff | C5P43_08915 | Not Available | Positive | 1651730 - 1652260 | 20171.1 |
| glutathione-regulated potassium-efflux system protein kefc | C5P43_08920 | Not Available | Positive | 1652253 - 1654115 | 67740.0 |
| type 3 dihydrofolate reductase | C5P43_08925 | Not Available | Positive | 1654307 - 1654786 | 18000.3 |
| bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | C5P43_08930 | Not Available | Negative | 1654864 - 1655706 | 31284.3 |
| co2+/mg2+ efflux protein apag | C5P43_08935 | Not Available | Negative | 1655713 - 1656090 | 13867.6 |
| ribosomal rna small subunit methyltransferase a | C5P43_08940 | Not Available | Negative | 1656093 - 1656914 | 30422.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





