Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fluoride efflux transporter crcb | C5P43_08845 | Not Available | Positive | 1640722 - 1641105 | 13766.1 |
| cold-shock protein cspe | C5P43_08850 | Not Available | Negative | 1641159 - 1641368 | 7463.84 |
| phospholipid:lipid a palmitoyltransferase | C5P43_08855 | Not Available | Negative | 1641543 - 1642103 | 21770.6 |
| c4-dicarboxylate abc transporter | C5P43_08860 | Not Available | Positive | 1642589 - 1642708 | 4589.67 |
| anaerobic c4-dicarboxylate transporter dcuc | C5P43_08865 | Not Available | Positive | 1642692 - 1644077 | 48387.2 |
| response regulator | C5P43_08870 | Not Available | Negative | 1644118 - 1644798 | 25454.9 |
| histidine kinase | C5P43_08875 | Not Available | Negative | 1644767 - 1646425 | 61659.7 |
| [citrate (pro-3s)-lyase] ligase | C5P43_08880 | Not Available | Positive | 1646805 - 1647863 | 40079.5 |
| citrate lyase acp | C5P43_08885 | Not Available | Positive | 1647878 - 1648174 | 10689.9 |
| citrate lyase subunit beta | C5P43_08890 | Not Available | Positive | 1648171 - 1649079 | 33111.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





