Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endolytic peptidoglycan transglycosylase rlpa | C5P43_08795 | Not Available | Positive | 1633467 - 1634555 | 37502.0 |
| d-alanyl-d-alanine carboxypeptidase | C5P43_08800 | Not Available | Positive | 1634695 - 1635906 | 44446.5 |
| hypothetical protein | C5P43_08805 | Not Available | Positive | 1636017 - 1636280 | 9827.92 |
| octanoyltransferase | C5P43_08810 | Not Available | Positive | 1636381 - 1637022 | 23884.0 |
| hypothetical protein | C5P43_08815 | Not Available | Negative | 1637074 - 1637223 | 5697.0 |
| lysr family transcriptional regulator | C5P43_08820 | Not Available | Positive | 1637281 - 1638234 | 35976.5 |
| dna-binding protein | C5P43_08825 | Not Available | Positive | 1638231 - 1638344 | 4359.19 |
| lipoyl synthase | C5P43_08830 | Not Available | Positive | 1638443 - 1639408 | 36073.8 |
| twin-arginine translocase subunit tata | C5P43_08835 | Not Available | Negative | 1639509 - 1639712 | 7024.71 |
| hydrolase ybem | C5P43_08840 | Not Available | Negative | 1639841 - 1640629 | 28683.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





