Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | C5P43_08435 | Not Available | Negative | 1572798 - 1573259 | 17433.8 |
| 23s rrna pseudouridine synthase e | C5P43_08440 | Not Available | Negative | 1573269 - 1573922 | 24881.8 |
| nadp-dependent isocitrate dehydrogenase | C5P43_08445 | Not Available | Positive | 1574094 - 1575344 | 45772.4 |
| anti-adapter protein iram | C5P43_08450 | Not Available | Negative | 1575447 - 1575770 | 12111.1 |
| duf1398 domain-containing protein | C5P43_08455 | Not Available | Negative | 1576466 - 1576870 | 15770.0 |
| helix-turn-helix-type transcriptional regulator | C5P43_08460 | Not Available | Negative | 1577091 - 1577822 | 28296.2 |
| blue light- and temperature-regulated antirepressor bluf | C5P43_08465 | Not Available | Negative | 1578027 - 1579238 | 45297.6 |
| two-component-system connector protein ycgz | C5P43_08470 | Not Available | Positive | 1579552 - 1579788 | 8729.47 |
| two-component-system connector protein ymga | C5P43_08475 | Not Available | Positive | 1579831 - 1580103 | 10345.5 |
| rcsb connector protein for regulation of biofilm and acid-resistance | C5P43_08480 | Not Available | Positive | 1580132 - 1580398 | 9694.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





