Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter permease potb | C5P43_08385 | Not Available | Negative | 1562489 - 1563346 | 32210.3 |
| fe3+/spermidine/putrescine abc transporter atp-binding protein | C5P43_08390 | Not Available | Negative | 1563330 - 1564466 | 43030.8 |
| hypothetical protein | C5P43_08395 | Not Available | Negative | 1564445 - 1564660 | 8408.22 |
| peptidase t | C5P43_08400 | Not Available | Positive | 1564716 - 1565945 | 44998.1 |
| 50s ribosomal protein l16 arginine hydroxylase | C5P43_08405 | Not Available | Negative | 1566091 - 1567212 | 42567.2 |
| sensor protein phoq | C5P43_08410 | Not Available | Negative | 1567288 - 1568748 | 55302.8 |
| two-component system response regulator phop | C5P43_08415 | Not Available | Negative | 1568748 - 1569419 | 25536.7 |
| adenylosuccinate lyase | C5P43_08420 | Not Available | Negative | 1569587 - 1570957 | 51529.7 |
| lysogenization protein hfld | C5P43_08425 | Not Available | Negative | 1570961 - 1571602 | 22949.0 |
| trna 2-thiouridine(34) synthase mnma | C5P43_08430 | Not Available | Negative | 1571638 - 1572744 | 40961.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





