Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aquaporin | C5P43_08180 | Not Available | Negative | 1523465 - 1524160 | 23734.2 |
| atp-dependent endonuclease | C5P43_08185 | Not Available | Positive | 1524586 - 1526244 | 63560.9 |
| duf535 domain-containing protein | C5P43_08190 | Not Available | Negative | 1526241 - 1527233 | 38277.7 |
| maca family efflux pump subunit | C5P43_08195 | Not Available | Positive | 1527348 - 1528463 | 40656.4 |
| macrolide abc transporter atp-binding protein/permease macb | C5P43_08200 | Not Available | Positive | 1528460 - 1530406 | 70710.8 |
| cold-shock protein cspd | C5P43_08205 | Not Available | Negative | 1530479 - 1530703 | 7969.41 |
| atp-dependent clp protease adaptor clps | C5P43_08210 | Not Available | Positive | 1531026 - 1531346 | 12179.7 |
| atp-dependent clp protease atp-binding subunit clpa | C5P43_08215 | Not Available | Positive | 1531377 - 1532839 | 54151.8 |
| amino-acid n-acetyltransferase | C5P43_08220 | Not Available | Negative | 1532840 - 1533967 | 41495.7 |
| n-acetylmuramoyl-l-alanine amidase | C5P43_08225 | Not Available | Positive | 1534199 - 1535452 | 45637.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





